Commands/chkmoves

From TNT

CHKMOVES
Version: 1.1.
Menu path: to do.

CHKMOVES
   Check moves that produce trees of equal score (or within specified 
   suboptimal difference), and report number of moves for each node. 
   This helps to quickly identify taxa that decrease resolution of the 
   consensus (or supports). 
   Arguments:  
        [    sort by distance, instead of number of moves 
        &    sort by rerooting depth 
        *    don't list or sort, just show moves on tree diagram 
   Options [, & or * can be followed by list of trees to process 
   (default=all), and this can be followed by the minimum value to 
   report (as /N; this is optional; default minimum is 1).  The 
   list (or the specification for the minimum value) can be followed 
   by ">N" (or "<N"), where N is the number of group to which 
   the taxa with value equal or greater than the minimum will be  
   added (or removed from).  In the case of internal nodes, all the 
   descendants of the node are added to (removed from) the group  
   specified. Note that when sorting by rerooting depth, the taxa  
   that belong to the rerooted clade are added/removed.  If macro 
   is ON, then using "=A" will store in array of name/number A, 
   the number/distance/depth for each node of the tree (a single tree 
   must be specified in this case); this can be used together with  
   ">N" or "<N".

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Example: list moves that produce trees of equal score.